IL_4WQR_046

3D structure

PDB id

4WQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GGGAAC*GGUGCCCCGCGAGGGGAGCCC

Length

27 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQR|1|13|G|1001
4WQR|1|13|G|1002
4WQR|1|13|G|1003
4WQR|1|13|A|1004
4WQR|1|13|A|1005
4WQR|1|13|C|1006
*
4WQR|1|13|G|1023
4WQR|1|13|G|1024
4WQR|1|13|U|1025
4WQR|1|13|G|1026
4WQR|1|13|C|1027
4WQR|1|13|C|1028
4WQR|1|13|C|1028|||A
4WQR|1|13|C|1028|||B
4WQR|1|13|G|1029
4WQR|1|13|C|1030
4WQR|1|13|G|1031
4WQR|1|13|A|1032
4WQR|1|13|G|1032|||A
4WQR|1|13|G|1032|||B
4WQR|1|13|G|1033
4WQR|1|13|G|1034
4WQR|1|13|A|1035
4WQR|1|13|G|1036
4WQR|1|13|C|1037
4WQR|1|13|C|1038
4WQR|1|13|C|1039

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 14

Large subunit ribosomal RNA; LSU rRNA

Chain 2E

30S ribosomal protein S3