IL_4WQR_154

3D structure

PDB id

4WQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

4WQR|1|14|A|2126, 4WQR|1|14|U|2167

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQR|1|14|G|2124
4WQR|1|14|G|2125
4WQR|1|14|A|2126
4WQR|1|14|G|2127
*
4WQR|1|14|C|2161
4WQR|1|14|G|2162
4WQR|1|14|C|2163
4WQR|1|14|C|2164
4WQR|1|14|G|2165
4WQR|1|14|G|2166
4WQR|1|14|U|2167
4WQR|1|14|G|2168
4WQR|1|14|A|2169
4WQR|1|14|A|2170
4WQR|1|14|A|2171
4WQR|1|14|U|2172
4WQR|1|14|A|2173
4WQR|1|14|C|2174

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 13

Small subunit ribosomal RNA; SSU rRNA

Chain 3L

Transfer RNA; tRNA