IL_4WQR_240
3D structure
- PDB id
- 4WQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- CCC*GGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CCC,GGG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WQR_240 not in the Motif Atlas
- Geometric match to IL_6IA2_002
- Geometric discrepancy: 0.1551
- The information below is about IL_6IA2_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4WQR|1|1G|C|1161
4WQR|1|1G|C|1162
4WQR|1|1G|C|1163
*
4WQR|1|1G|G|1173
4WQR|1|1G|G|1174
4WQR|1|1G|G|1175
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 12
- 30S ribosomal protein S2
- Chain 1I
- 30S ribosomal protein S10
- Chain 62
- 30S ribosomal protein S7
- Chain 82
- 30S ribosomal protein S9
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