IL_4WQR_385

3D structure

PDB id

4WQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

UAGUUGCCAGCG*CGGGCACUCUA

Length

23 nucleotides

Bulged bases

4WQR|1|13|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQR|1|13|U|1122
4WQR|1|13|A|1123
4WQR|1|13|G|1124
4WQR|1|13|U|1125
4WQR|1|13|U|1126
4WQR|1|13|G|1127
4WQR|1|13|C|1128
4WQR|1|13|C|1129
4WQR|1|13|A|1130
4WQR|1|13|G|1131
4WQR|1|13|C|1132
4WQR|1|13|G|1133
*
4WQR|1|13|C|1141
4WQR|1|13|G|1142
4WQR|1|13|G|1143
4WQR|1|13|G|1144
4WQR|1|13|C|1145
4WQR|1|13|A|1146
4WQR|1|13|C|1147
4WQR|1|13|U|1148
4WQR|1|13|C|1149
4WQR|1|13|U|1150
4WQR|1|13|A|1151

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 1I

30S ribosomal protein S10

Chain 8E

30S ribosomal protein S9