IL_4WQR_390

3D structure

PDB id

4WQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CCGCGAAGACAGCC*GGUCGAGUGG

Length

24 nucleotides

Bulged bases

4WQR|1|14|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQR|1|14|C|1040
4WQR|1|14|C|1041
4WQR|1|14|G|1042
4WQR|1|14|C|1043
4WQR|1|14|G|1044
4WQR|1|14|A|1045
4WQR|1|14|A|1046
4WQR|1|14|G|1047
4WQR|1|14|A|1048
4WQR|1|14|C|1049
4WQR|1|14|A|1050
4WQR|1|14|G|1051
4WQR|1|14|C|1052
4WQR|1|14|C|1053
*
4WQR|1|14|G|1106
4WQR|1|14|G|1107
4WQR|1|14|U|1108
4WQR|1|14|C|1109
4WQR|1|14|G|1110
4WQR|1|14|A|1111
4WQR|1|14|G|1112
4WQR|1|14|U|1113
4WQR|1|14|G|1114
4WQR|1|14|G|1115

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 59

50S ribosomal protein L6

Chain D5

50S ribosomal protein L25