IL_4WQR_411
3D structure
- PDB id
- 4WQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GUCC*GGC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WQR_411 not in the Motif Atlas
- Geometric match to IL_1U6B_001
- Geometric discrepancy: 0.312
- The information below is about IL_1U6B_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_42997.4
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 21
Unit IDs
4WQR|1|1H|G|2400
4WQR|1|1H|U|2401
4WQR|1|1H|C|2402
4WQR|1|1H|C|2403
*
4WQR|1|1H|G|2414
4WQR|1|1H|G|2415
4WQR|1|1H|C|2416
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 78
- 50S ribosomal protein L15
- Chain J8
- 50S ribosomal protein L28
- Chain O8
- 50S ribosomal protein L33
- Chain Q8
- 50S ribosomal protein L35
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