IL_4WQU_230

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAAGACAGCCAG*CUGGUCGAG

Length

22 nucleotides

Bulged bases

4WQU|1|CA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|CA|C|1043
4WQU|1|CA|G|1044
4WQU|1|CA|A|1045
4WQU|1|CA|A|1046
4WQU|1|CA|G|1047
4WQU|1|CA|A|1048
4WQU|1|CA|C|1049
4WQU|1|CA|A|1050
4WQU|1|CA|G|1051
4WQU|1|CA|C|1052
4WQU|1|CA|C|1053
4WQU|1|CA|A|1054
4WQU|1|CA|G|1055
*
4WQU|1|CA|C|1104
4WQU|1|CA|U|1105
4WQU|1|CA|G|1106
4WQU|1|CA|G|1107
4WQU|1|CA|U|1108
4WQU|1|CA|C|1109
4WQU|1|CA|G|1110
4WQU|1|CA|A|1111
4WQU|1|CA|G|1112

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C9

50S ribosomal protein L36

Chain CH

50S ribosomal protein L6

Chain CK

50S ribosomal protein L10