IL_4WQU_360

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UUAGUUG*CACUCUAA

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|DA|U|1121
4WQU|1|DA|U|1122
4WQU|1|DA|A|1123
4WQU|1|DA|G|1124
4WQU|1|DA|U|1125
4WQU|1|DA|U|1126
4WQU|1|DA|G|1127
*
4WQU|1|DA|C|1145
4WQU|1|DA|A|1146
4WQU|1|DA|C|1147
4WQU|1|DA|U|1148
4WQU|1|DA|C|1149
4WQU|1|DA|U|1150
4WQU|1|DA|A|1151
4WQU|1|DA|A|1152

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DI

30S ribosomal protein S9

Chain DJ

30S ribosomal protein S10