IL_4WQU_383

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UGGUCGCGCCUG*CUGGCGCGGCUG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|AA|U|2121
4WQU|1|AA|G|2122
4WQU|1|AA|G|2123
4WQU|1|AA|U|2124
4WQU|1|AA|C|2125
4WQU|1|AA|G|2126
4WQU|1|AA|C|2127
4WQU|1|AA|G|2128
4WQU|1|AA|C|2129
4WQU|1|AA|C|2130
4WQU|1|AA|U|2131
4WQU|1|AA|G|2132
*
4WQU|1|AA|C|2201
4WQU|1|AA|U|2202
4WQU|1|AA|G|2203
4WQU|1|AA|G|2204
4WQU|1|AA|C|2205
4WQU|1|AA|G|2206
4WQU|1|AA|C|2207
4WQU|1|AA|G|2208
4WQU|1|AA|G|2209
4WQU|1|AA|C|2210
4WQU|1|AA|U|2211
4WQU|1|AA|G|2212

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain AC

50S ribosomal protein L1

Chain BY

Transfer RNA; tRNA