IL_4WQU_396

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUCGCGCCUG*CUGGCGCGGC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|CA|G|2101
4WQU|1|CA|U|2102
4WQU|1|CA|C|2103
4WQU|1|CA|G|2104
4WQU|1|CA|C|2105
4WQU|1|CA|G|2106
4WQU|1|CA|C|2107
4WQU|1|CA|C|2108
4WQU|1|CA|U|2109
4WQU|1|CA|G|2110
*
4WQU|1|CA|C|2179
4WQU|1|CA|U|2180
4WQU|1|CA|G|2181
4WQU|1|CA|G|2182
4WQU|1|CA|C|2183
4WQU|1|CA|G|2184
4WQU|1|CA|C|2185
4WQU|1|CA|G|2186
4WQU|1|CA|G|2187
4WQU|1|CA|C|2188

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CC

50S ribosomal protein L1

Chain DY

Transfer RNA; tRNA