IL_4WRA_388

3D structure

PDB id

4WRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

UGUAGA*UCCGAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WRA|1|14|U|858
4WRA|1|14|G|859
4WRA|1|14|U|860
4WRA|1|14|A|861
4WRA|1|14|G|862
4WRA|1|14|A|863
*
4WRA|1|14|U|913
4WRA|1|14|C|914
4WRA|1|14|C|915
4WRA|1|14|G|916
4WRA|1|14|A|917
4WRA|1|14|A|918
4WRA|1|14|G|919

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 1J

5S ribosomal RNA; 5S rRNA

Chain 45

50S ribosomal protein L16

Chain D5

50S ribosomal protein L25

Chain E5

50S ribosomal protein L27