Loop IL_4WRA

3D structure

PDB id: 4WRA (explore in PDB, NAKB, or RNA 3D Hub)
Description: Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å

Loop

Sequence: CGAAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAGUG*CUCACUGGUCGAG
Length: 62 nucleotides
Bulged bases: 4WRA|1|1H|A|1046, 4WRA|1|1H|U|1061, 4WRA|1|1H|A|1070, 4WRA|1|1H|A|1084
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4WRA|1|1H|C|1043
4WRA|1|1H|G|1044
4WRA|1|1H|A|1045
4WRA|1|1H|A|1046
4WRA|1|1H|G|1047
4WRA|1|1H|A|1048
4WRA|1|1H|C|1049
4WRA|1|1H|A|1050
4WRA|1|1H|G|1051
4WRA|1|1H|C|1052
4WRA|1|1H|C|1053
4WRA|1|1H|A|1054
4WRA|1|1H|G|1055
4WRA|1|1H|G|1056
4WRA|1|1H|A|1057
4WRA|1|1H|U|1058
4WRA|1|1H|G|1059
4WRA|1|1H|U|1060
4WRA|1|1H|U|1061
4WRA|1|1H|G|1062
4WRA|1|1H|G|1063
4WRA|1|1H|C|1064
4WRA|1|1H|U|1065
4WRA|1|1H|U|1066
4WRA|1|1H|A|1067
4WRA|1|1H|G|1068
4WRA|1|1H|A|1069
4WRA|1|1H|A|1070
4WRA|1|1H|G|1071
4WRA|1|1H|C|1072
4WRA|1|1H|A|1073
4WRA|1|1H|G|1074
4WRA|1|1H|C|1075
4WRA|1|1H|C|1076
4WRA|1|1H|A|1077
4WRA|1|1H|U|1078
4WRA|1|1H|C|1079
4WRA|1|1H|A|1080
4WRA|1|1H|U|1081
4WRA|1|1H|U|1082
4WRA|1|1H|U|1083
4WRA|1|1H|A|1084
4WRA|1|1H|A|1085
4WRA|1|1H|A|1086
4WRA|1|1H|G|1087
4WRA|1|1H|A|1088
4WRA|1|1H|G|1089
4WRA|1|1H|U|1090
4WRA|1|1H|G|1091
*
4WRA|1|1H|C|1100
4WRA|1|1H|U|1101
4WRA|1|1H|C|1102
4WRA|1|1H|A|1103
4WRA|1|1H|C|1104
4WRA|1|1H|U|1105
4WRA|1|1H|G|1106
4WRA|1|1H|G|1107
4WRA|1|1H|U|1108
4WRA|1|1H|C|1109
4WRA|1|1H|G|1110
4WRA|1|1H|A|1111
4WRA|1|1H|G|1112

Current chains

Chain 1H: 23S ribosomal RNA

Nearby chains

Chain 51: 50S ribosomal protein L6

IL_4WRA_406