IL_4WRA_426

3D structure

PDB id

4WRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GGAGC*GCGCCGGUGAAAUAC

Length

20 nucleotides

Bulged bases

4WRA|1|1H|A|2126, 4WRA|1|1H|U|2167

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WRA|1|1H|G|2124
4WRA|1|1H|G|2125
4WRA|1|1H|A|2126
4WRA|1|1H|G|2127
4WRA|1|1H|C|2128
*
4WRA|1|1H|G|2160
4WRA|1|1H|C|2161
4WRA|1|1H|G|2162
4WRA|1|1H|C|2163
4WRA|1|1H|C|2164
4WRA|1|1H|G|2165
4WRA|1|1H|G|2166
4WRA|1|1H|U|2167
4WRA|1|1H|G|2168
4WRA|1|1H|A|2169
4WRA|1|1H|A|2170
4WRA|1|1H|A|2171
4WRA|1|1H|U|2172
4WRA|1|1H|A|2173
4WRA|1|1H|C|2174

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 3K

Transfer RNA; tRNA