IL_4WRO_164
3D structure
- PDB id
- 4WRO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- UG*CAAG
- Length
- 6 nucleotides
- Bulged bases
- 4WRO|1|14|A|2542||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WRO_164 not in the Motif Atlas
- Homologous match to IL_7RQB_099
- Geometric discrepancy: 0.1266
- The information below is about IL_7RQB_099
- Detailed Annotation
- Major groove platform with intercalation
- Broad Annotation
- Major groove platform
- Motif group
- IL_95601.3
- Basepair signature
- cWW-tSH-cWW
- Number of instances in this motif group
- 10
Unit IDs
4WRO|1|14|U|2522||||P_1
4WRO|1|14|G|2523||||P_1
*
4WRO|1|14|C|2540||||P_1
4WRO|1|14|A|2541||||P_1
4WRO|1|14|A|2542||||P_1
4WRO|1|14|G|2543||||P_1
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: