IL_4WSD_380

3D structure

PDB id

4WSD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

UCGGACACCGAAUC*GAUAGGUGA

Length

23 nucleotides

Bulged bases

4WSD|1|14|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WSD|1|14|U|273|||E
4WSD|1|14|C|273|||F
4WSD|1|14|G|274
4WSD|1|14|G|275
4WSD|1|14|A|276
4WSD|1|14|C|277
4WSD|1|14|A|278
4WSD|1|14|C|279
4WSD|1|14|C|280
4WSD|1|14|G|281
4WSD|1|14|A|282
4WSD|1|14|A|283
4WSD|1|14|U|284
4WSD|1|14|C|285
*
4WSD|1|14|G|356
4WSD|1|14|A|357
4WSD|1|14|U|358
4WSD|1|14|A|359
4WSD|1|14|G|360
4WSD|1|14|G|361
4WSD|1|14|U|362
4WSD|1|14|G|363
4WSD|1|14|A|363|||A

Current chains

Chain 14

23S ribosomal RNA

Nearby chains