IL_4WSM_044

3D structure

PDB id

4WSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGAAC*GGUGCCCCGCGAGGGGAGCC

Length

25 nucleotides

Bulged bases

4WSM|1|13|U|1025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WSM|1|13|G|1002
4WSM|1|13|G|1003
4WSM|1|13|A|1004
4WSM|1|13|A|1005
4WSM|1|13|C|1006
*
4WSM|1|13|G|1023
4WSM|1|13|G|1024
4WSM|1|13|U|1025
4WSM|1|13|G|1026
4WSM|1|13|C|1027
4WSM|1|13|C|1028
4WSM|1|13|C|1028|||A
4WSM|1|13|C|1028|||B
4WSM|1|13|G|1029
4WSM|1|13|C|1030
4WSM|1|13|G|1031
4WSM|1|13|A|1032
4WSM|1|13|G|1032|||A
4WSM|1|13|G|1032|||B
4WSM|1|13|G|1033
4WSM|1|13|G|1034
4WSM|1|13|A|1035
4WSM|1|13|G|1036
4WSM|1|13|C|1037
4WSM|1|13|C|1038

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 14

Large subunit ribosomal RNA; LSU rRNA