IL_4WSM_092
3D structure
- PDB id
- 4WSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGA*UAACC
- Length
- 8 nucleotides
- Bulged bases
- 4WSM|1|14|G|776, 4WSM|1|14|A|788, 4WSM|1|14|A|789, 4WSM|1|14|C|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WSM_092 not in the Motif Atlas
- Homologous match to IL_7A0S_021
- Geometric discrepancy: 0.0966
- The information below is about IL_7A0S_021
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
4WSM|1|14|G|775
4WSM|1|14|G|776
4WSM|1|14|A|777
*
4WSM|1|14|U|787
4WSM|1|14|A|788
4WSM|1|14|A|789
4WSM|1|14|C|790
4WSM|1|14|C|791
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 19
- 50S ribosomal protein L2
- Chain 39
- 50S ribosomal protein L4
- Chain A5
- 50S ribosomal protein L22
- Chain L5
- 50S ribosomal protein L34
Coloring options: