IL_4WSM_236
3D structure
- PDB id
- 4WSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GCCAC*GGAGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WSM_236 not in the Motif Atlas
- Homologous match to IL_5J7L_056
- Geometric discrepancy: 0.505
- The information below is about IL_5J7L_056
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
4WSM|1|1G|G|1258
4WSM|1|1G|C|1259
4WSM|1|1G|C|1260
4WSM|1|1G|A|1261
4WSM|1|1G|C|1262
*
4WSM|1|1G|G|1273
4WSM|1|1G|G|1274
4WSM|1|1G|A|1275
4WSM|1|1G|G|1276
4WSM|1|1G|C|1277
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 1A
- 30S ribosomal protein S10
- Chain 1B
- 30S ribosomal protein Thx
- Chain 22
- 30S ribosomal protein S3
Coloring options: