IL_4WSM_408

3D structure

PDB id

4WSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUGCGUAGGAUAGGUGGGAGCC*GGCGCCGGUGAAAUACCACCCUG

Length

45 nucleotides

Bulged bases

4WSM|1|1H|C|2111, 4WSM|1|1H|G|2166, 4WSM|1|1H|U|2167, 4WSM|1|1H|A|2170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WSM|1|1H|C|2108
4WSM|1|1H|U|2109
4WSM|1|1H|G|2110
4WSM|1|1H|C|2111
4WSM|1|1H|G|2112
4WSM|1|1H|U|2113
4WSM|1|1H|A|2114
4WSM|1|1H|G|2115
4WSM|1|1H|G|2116
4WSM|1|1H|A|2117
4WSM|1|1H|U|2118
4WSM|1|1H|A|2119
4WSM|1|1H|G|2120
4WSM|1|1H|G|2121
4WSM|1|1H|U|2122
4WSM|1|1H|G|2123
4WSM|1|1H|G|2124
4WSM|1|1H|G|2125
4WSM|1|1H|A|2126
4WSM|1|1H|G|2127
4WSM|1|1H|C|2128
4WSM|1|1H|C|2129
*
4WSM|1|1H|G|2159
4WSM|1|1H|G|2160
4WSM|1|1H|C|2161
4WSM|1|1H|G|2162
4WSM|1|1H|C|2163
4WSM|1|1H|C|2164
4WSM|1|1H|G|2165
4WSM|1|1H|G|2166
4WSM|1|1H|U|2167
4WSM|1|1H|G|2168
4WSM|1|1H|A|2169
4WSM|1|1H|A|2170
4WSM|1|1H|A|2171
4WSM|1|1H|U|2172
4WSM|1|1H|A|2173
4WSM|1|1H|C|2174
4WSM|1|1H|C|2175
4WSM|1|1H|A|2176
4WSM|1|1H|C|2177
4WSM|1|1H|C|2178
4WSM|1|1H|C|2179
4WSM|1|1H|U|2180
4WSM|1|1H|G|2181

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 3K

Transfer RNA; tRNA