IL_4WT1_047

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GAAC*GGUGCCCCGCGAGGGGAGC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT1|1|13|G|1003
4WT1|1|13|A|1004
4WT1|1|13|A|1005
4WT1|1|13|C|1006
*
4WT1|1|13|G|1023
4WT1|1|13|G|1024
4WT1|1|13|U|1025
4WT1|1|13|G|1026
4WT1|1|13|C|1027
4WT1|1|13|C|1028
4WT1|1|13|C|1028|||A
4WT1|1|13|C|1028|||B
4WT1|1|13|G|1029
4WT1|1|13|C|1030
4WT1|1|13|G|1031
4WT1|1|13|A|1032
4WT1|1|13|G|1032|||A
4WT1|1|13|G|1032|||B
4WT1|1|13|G|1033
4WT1|1|13|G|1034
4WT1|1|13|A|1035
4WT1|1|13|G|1036
4WT1|1|13|C|1037

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 14

Large subunit ribosomal RNA; LSU rRNA

Chain 2E

30S ribosomal protein S3