IL_4WT1_182

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

CCACGGCGUCAAGCCGGUAAG*CGAGG

Length

26 nucleotides

Bulged bases

4WT1|1|14|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT1|1|14|C|2788
4WT1|1|14|C|2789
4WT1|1|14|A|2790
4WT1|1|14|C|2791
4WT1|1|14|G|2792
4WT1|1|14|G|2793
4WT1|1|14|C|2794
4WT1|1|14|G|2795
4WT1|1|14|U|2797
4WT1|1|14|C|2798
4WT1|1|14|A|2799
4WT1|1|14|A|2801
4WT1|1|14|G|2802
4WT1|1|14|C|2803
4WT1|1|14|C|2804
4WT1|1|14|G|2805
4WT1|1|14|G|2807
4WT1|1|14|U|2808
4WT1|1|14|A|2809
4WT1|1|14|A|2810
4WT1|1|14|G|2811
*
4WT1|1|14|C|2889
4WT1|1|14|G|2891
4WT1|1|14|A|2892
4WT1|1|14|G|2893
4WT1|1|14|G|2894

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 29

50S ribosomal protein L3

Chain A5

50S ribosomal protein L22