IL_4WT1_233
3D structure
- PDB id
- 4WT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GGU*AUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT1_233 not in the Motif Atlas
- Geometric match to IL_4TS2_003
- Geometric discrepancy: 0.2008
- The information below is about IL_4TS2_003
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
4WT1|1|1G|G|941
4WT1|1|1G|G|942
4WT1|1|1G|U|943
*
4WT1|1|1G|A|1340
4WT1|1|1G|U|1341
4WT1|1|1G|C|1342
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 2L
- Transfer RNA; tRNA
- Chain 3L
- Transfer RNA; tRNA
- Chain 62
- 30S ribosomal protein S7
- Chain 82
- 30S ribosomal protein S9
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