IL_4WT1_254
3D structure
- PDB id
- 4WT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GCCAC*GGAGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT1_254 not in the Motif Atlas
- Geometric match to IL_7A0S_056
- Geometric discrepancy: 0.3933
- The information below is about IL_7A0S_056
- Detailed Annotation
- Double sheared with near cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.1
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
4WT1|1|1G|G|1258
4WT1|1|1G|C|1259
4WT1|1|1G|C|1260
4WT1|1|1G|A|1261
4WT1|1|1G|C|1262
*
4WT1|1|1G|G|1273
4WT1|1|1G|G|1274
4WT1|1|1G|A|1275
4WT1|1|1G|G|1276
4WT1|1|1G|C|1277
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 1B
- 30S ribosomal protein Thx
- Chain 22
- 30S ribosomal protein S3
- Chain 5A
- 30S ribosomal protein S14 type Z
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