IL_4WT1_400

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

UCGGACACCGAAU*AUAGGUGA

Length

21 nucleotides

Bulged bases

4WT1|1|14|A|283, 4WT1|1|14|U|362

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT1|1|14|U|273|||E
4WT1|1|14|C|273|||F
4WT1|1|14|G|274
4WT1|1|14|G|275
4WT1|1|14|A|276
4WT1|1|14|C|277
4WT1|1|14|A|278
4WT1|1|14|C|279
4WT1|1|14|C|280
4WT1|1|14|G|281
4WT1|1|14|A|282
4WT1|1|14|A|283
4WT1|1|14|U|284
*
4WT1|1|14|A|357
4WT1|1|14|U|358
4WT1|1|14|A|359
4WT1|1|14|G|360
4WT1|1|14|G|361
4WT1|1|14|U|362
4WT1|1|14|G|363
4WT1|1|14|A|363|||A

Current chains

Chain 14

23S ribosomal RNA

Nearby chains