IL_4WT1_404

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

AGGAU*AUUUAAAGAGUGCGUAAUAGCUCACU

Length

31 nucleotides

Bulged bases

4WT1|1|14|A|1088, 4WT1|1|14|G|1089, 4WT1|1|14|A|1095

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT1|1|14|A|1054
4WT1|1|14|G|1055
4WT1|1|14|G|1056
4WT1|1|14|A|1057
4WT1|1|14|U|1058
*
4WT1|1|14|A|1080
4WT1|1|14|U|1081
4WT1|1|14|U|1082
4WT1|1|14|U|1083
4WT1|1|14|A|1084
4WT1|1|14|A|1085
4WT1|1|14|A|1086
4WT1|1|14|G|1087
4WT1|1|14|A|1088
4WT1|1|14|G|1089
4WT1|1|14|U|1090
4WT1|1|14|G|1091
4WT1|1|14|C|1092
4WT1|1|14|G|1093
4WT1|1|14|U|1094
4WT1|1|14|A|1095
4WT1|1|14|A|1096
4WT1|1|14|U|1097
4WT1|1|14|A|1098
4WT1|1|14|G|1099
4WT1|1|14|C|1100
4WT1|1|14|U|1101
4WT1|1|14|C|1102
4WT1|1|14|A|1103
4WT1|1|14|C|1104
4WT1|1|14|U|1105

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 59

50S ribosomal protein L6