IL_4WT1_415
3D structure
- PDB id
- 4WT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GGAGUAG*CGCAGAUACC
- Length
- 17 nucleotides
- Bulged bases
- 4WT1|1|1G|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT1_415 not in the Motif Atlas
- Geometric match to IL_4V88_508
- Geometric discrepancy: 0.2542
- The information below is about IL_4V88_508
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99095.1
- Basepair signature
- cWW-tSS-L-tSH-L-R-R-R-L-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
4WT1|1|1G|G|682
4WT1|1|1G|G|683
4WT1|1|1G|A|684
4WT1|1|1G|G|685
4WT1|1|1G|U|686
4WT1|1|1G|A|687
4WT1|1|1G|G|688
*
4WT1|1|1G|C|699
4WT1|1|1G|G|700
4WT1|1|1G|C|701
4WT1|1|1G|A|702
4WT1|1|1G|G|703
4WT1|1|1G|A|704
4WT1|1|1G|U|705
4WT1|1|1G|A|706
4WT1|1|1G|C|707
4WT1|1|1G|C|708
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2A
- 30S ribosomal protein S11
- Chain 9A
- 30S ribosomal protein S18
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