IL_4WU1_155

3D structure

PDB id

4WU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUGGGAG*CGCCGGUGAAAUACCAC

Length

24 nucleotides

Bulged bases

4WU1|1|14|U|2167, 4WU1|1|14|A|2170, 4WU1|1|14|U|2172, 4WU1|1|14|A|2173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WU1|1|14|G|2121
4WU1|1|14|U|2122
4WU1|1|14|G|2123
4WU1|1|14|G|2124
4WU1|1|14|G|2125
4WU1|1|14|A|2126
4WU1|1|14|G|2127
*
4WU1|1|14|C|2161
4WU1|1|14|G|2162
4WU1|1|14|C|2163
4WU1|1|14|C|2164
4WU1|1|14|G|2165
4WU1|1|14|G|2166
4WU1|1|14|U|2167
4WU1|1|14|G|2168
4WU1|1|14|A|2169
4WU1|1|14|A|2170
4WU1|1|14|A|2171
4WU1|1|14|U|2172
4WU1|1|14|A|2173
4WU1|1|14|C|2174
4WU1|1|14|C|2175
4WU1|1|14|A|2176
4WU1|1|14|C|2177

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 13

Small subunit ribosomal RNA; SSU rRNA

Chain 3L

Transfer RNA; tRNA

Chain 79

50S ribosomal protein L1