IL_4WU1_238
3D structure
- PDB id
- 4WU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WU1_238 not in the Motif Atlas
- Geometric match to IL_5J7L_053
- Geometric discrepancy: 0.1856
- The information below is about IL_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42032.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4WU1|1|1G|C|1158
4WU1|1|1G|U|1159
4WU1|1|1G|G|1160
4WU1|1|1G|C|1161
*
4WU1|1|1G|G|1175
4WU1|1|1G|A|1176
4WU1|1|1G|G|1177
4WU1|1|1G|G|1178
4WU1|1|1G|A|1179
4WU1|1|1G|A|1180
4WU1|1|1G|G|1181
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 12
- 30S ribosomal protein S2
- Chain 82
- 30S ribosomal protein S9
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