IL_4WU1_259
3D structure
- PDB id
- 4WU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAACUG*CUCAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WU1_259 not in the Motif Atlas
- Homologous match to IL_7RQB_006
- Geometric discrepancy: 0.0507
- The information below is about IL_7RQB_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.7
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
4WU1|1|1H|G|188
4WU1|1|1H|G|189
4WU1|1|1H|A|190
4WU1|1|1H|A|191
4WU1|1|1H|C|192
4WU1|1|1H|U|193
4WU1|1|1H|G|194
*
4WU1|1|1H|C|201
4WU1|1|1H|U|202
4WU1|1|1H|C|203
4WU1|1|1H|A|204
4WU1|1|1H|G|205
4WU1|1|1H|U|206
4WU1|1|1H|A|207
4WU1|1|1H|C|208
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 78
- 50S ribosomal protein L15
- Chain J8
- 50S ribosomal protein L28
- Chain P8
- 50S ribosomal protein L34
- Chain Q8
- 50S ribosomal protein L35
Coloring options: