IL_4WU1_296

3D structure

PDB id

4WU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAG*CAC

Length

36 nucleotides

Bulged bases

4WU1|1|1H|U|1061, 4WU1|1|1H|U|1066, 4WU1|1|1H|A|1070, 4WU1|1|1H|U|1083

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WU1|1|1H|G|1055
4WU1|1|1H|G|1056
4WU1|1|1H|A|1057
4WU1|1|1H|U|1058
4WU1|1|1H|G|1059
4WU1|1|1H|U|1060
4WU1|1|1H|U|1061
4WU1|1|1H|G|1062
4WU1|1|1H|G|1063
4WU1|1|1H|C|1064
4WU1|1|1H|U|1065
4WU1|1|1H|U|1066
4WU1|1|1H|A|1067
4WU1|1|1H|G|1068
4WU1|1|1H|A|1069
4WU1|1|1H|A|1070
4WU1|1|1H|G|1071
4WU1|1|1H|C|1072
4WU1|1|1H|A|1073
4WU1|1|1H|G|1074
4WU1|1|1H|C|1075
4WU1|1|1H|C|1076
4WU1|1|1H|A|1077
4WU1|1|1H|U|1078
4WU1|1|1H|C|1079
4WU1|1|1H|A|1080
4WU1|1|1H|U|1081
4WU1|1|1H|U|1082
4WU1|1|1H|U|1083
4WU1|1|1H|A|1084
4WU1|1|1H|A|1085
4WU1|1|1H|A|1086
4WU1|1|1H|G|1087
*
4WU1|1|1H|C|1102
4WU1|1|1H|A|1103
4WU1|1|1H|C|1104

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains