IL_4WU1_392

3D structure

PDB id

4WU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

AGGAUG*CAUUUAAAGAGUGCGUAAUAGCUCACU

Length

33 nucleotides

Bulged bases

4WU1|1|14|U|1082, 4WU1|1|14|U|1083, 4WU1|1|14|A|1084, 4WU1|1|14|A|1088, 4WU1|1|14|A|1095

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WU1|1|14|A|1054
4WU1|1|14|G|1055
4WU1|1|14|G|1056
4WU1|1|14|A|1057
4WU1|1|14|U|1058
4WU1|1|14|G|1059
*
4WU1|1|14|C|1079
4WU1|1|14|A|1080
4WU1|1|14|U|1081
4WU1|1|14|U|1082
4WU1|1|14|U|1083
4WU1|1|14|A|1084
4WU1|1|14|A|1085
4WU1|1|14|A|1086
4WU1|1|14|G|1087
4WU1|1|14|A|1088
4WU1|1|14|G|1089
4WU1|1|14|U|1090
4WU1|1|14|G|1091
4WU1|1|14|C|1092
4WU1|1|14|G|1093
4WU1|1|14|U|1094
4WU1|1|14|A|1095
4WU1|1|14|A|1096
4WU1|1|14|U|1097
4WU1|1|14|A|1098
4WU1|1|14|G|1099
4WU1|1|14|C|1100
4WU1|1|14|U|1101
4WU1|1|14|C|1102
4WU1|1|14|A|1103
4WU1|1|14|C|1104
4WU1|1|14|U|1105

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 59

50S ribosomal protein L6