3D structure

PDB id
4WU1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
AGGAUG*CAUUUAAAGAGUGCGUAAUAGCUCACU
Length
33 nucleotides
Bulged bases
4WU1|1|14|U|1082, 4WU1|1|14|U|1083, 4WU1|1|14|A|1084, 4WU1|1|14|A|1088, 4WU1|1|14|A|1095
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4WU1|1|14|A|1054
4WU1|1|14|G|1055
4WU1|1|14|G|1056
4WU1|1|14|A|1057
4WU1|1|14|U|1058
4WU1|1|14|G|1059
*
4WU1|1|14|C|1079
4WU1|1|14|A|1080
4WU1|1|14|U|1081
4WU1|1|14|U|1082
4WU1|1|14|U|1083
4WU1|1|14|A|1084
4WU1|1|14|A|1085
4WU1|1|14|A|1086
4WU1|1|14|G|1087
4WU1|1|14|A|1088
4WU1|1|14|G|1089
4WU1|1|14|U|1090
4WU1|1|14|G|1091
4WU1|1|14|C|1092
4WU1|1|14|G|1093
4WU1|1|14|U|1094
4WU1|1|14|A|1095
4WU1|1|14|A|1096
4WU1|1|14|U|1097
4WU1|1|14|A|1098
4WU1|1|14|G|1099
4WU1|1|14|C|1100
4WU1|1|14|U|1101
4WU1|1|14|C|1102
4WU1|1|14|A|1103
4WU1|1|14|C|1104
4WU1|1|14|U|1105

Current chains

Chain 14
23S ribosomal RNA

Nearby chains

Chain 59
50S ribosomal protein L6

Coloring options:

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