IL_4WU1_397

3D structure

PDB id

4WU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CACGGCGUCAAGCCGGUAAG*CGAGG

Length

25 nucleotides

Bulged bases

4WU1|1|14|U|2797, 4WU1|1|14|C|2798, 4WU1|1|14|A|2799

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WU1|1|14|C|2789
4WU1|1|14|A|2790
4WU1|1|14|C|2791
4WU1|1|14|G|2792
4WU1|1|14|G|2793
4WU1|1|14|C|2794
4WU1|1|14|G|2795
4WU1|1|14|U|2797
4WU1|1|14|C|2798
4WU1|1|14|A|2799
4WU1|1|14|A|2801
4WU1|1|14|G|2802
4WU1|1|14|C|2803
4WU1|1|14|C|2804
4WU1|1|14|G|2805
4WU1|1|14|G|2807
4WU1|1|14|U|2808
4WU1|1|14|A|2809
4WU1|1|14|A|2810
4WU1|1|14|G|2811
*
4WU1|1|14|C|2889
4WU1|1|14|G|2891
4WU1|1|14|A|2892
4WU1|1|14|G|2893
4WU1|1|14|G|2894

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 29

50S ribosomal protein L3