IL_4WZD_020
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAACCC*GGACUGAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WZD_020 not in the Motif Atlas
- Homologous match to IL_6CZR_131
- Geometric discrepancy: 0.1787
- The information below is about IL_6CZR_131
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_30149.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4WZD|1|13|G|450||||P_1
4WZD|1|13|A|451||||P_1
4WZD|1|13|A|452||||P_1
4WZD|1|13|A|453||||P_1
4WZD|1|13|C|454||||P_1
4WZD|1|13|C|455||||P_1
4WZD|1|13|C|456||||P_1
*
4WZD|1|13|G|476||||P_1
4WZD|1|13|G|477||||P_1
4WZD|1|13|A|478||||P_1
4WZD|1|13|C|479||||P_1
4WZD|1|13|U|480||||P_1
4WZD|1|13|G|481||||P_1
4WZD|1|13|A|482||||P_1
4WZD|1|13|C|483||||P_1
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 7I
- 30S ribosomal protein S16
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