IL_4WZD_263
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAGC
- Length
- 18 nucleotides
- Bulged bases
- 4WZD|1|1H|U|504||||P_1, 4WZD|1|1H|G|508||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WZD_263 not in the Motif Atlas
- Geometric match to IL_8VTW_013
- Geometric discrepancy: 0.0518
- The information below is about IL_8VTW_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.7
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
4WZD|1|1H|G|481||||P_1
4WZD|1|1H|A|482||||P_1
4WZD|1|1H|A|483||||P_1
4WZD|1|1H|C|484||||P_1
*
4WZD|1|1H|G|496||||P_1
4WZD|1|1H|A|497||||P_1
4WZD|1|1H|G|498||||P_1
4WZD|1|1H|U|499||||P_1
4WZD|1|1H|G|500||||P_1
4WZD|1|1H|A|501||||P_1
4WZD|1|1H|A|502||||P_1
4WZD|1|1H|A|503||||P_1
4WZD|1|1H|U|504||||P_1
4WZD|1|1H|A|505||||P_1
4WZD|1|1H|G|506||||P_1
4WZD|1|1H|A|507||||P_1
4WZD|1|1H|G|508||||P_1
4WZD|1|1H|C|509||||P_1
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain E8
- 50S ribosomal protein L22
- Chain G8
- 50S ribosomal protein L24
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