IL_4WZD_374
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WZD_374 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.0839
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
4WZD|1|13|G|673||||P_1
4WZD|1|13|G|674||||P_1
4WZD|1|13|A|675||||P_1
4WZD|1|13|A|676||||P_1
4WZD|1|13|U|677||||P_1
*
4WZD|1|13|G|713||||P_1
4WZD|1|13|G|714||||P_1
4WZD|1|13|A|715||||P_1
4WZD|1|13|A|716||||P_1
4WZD|1|13|C|717||||P_1
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 11
- 50S ribosomal protein L2
- Chain 2I
- 30S ribosomal protein S11
- Chain 5E
- 30S ribosomal protein S6
- Chain 9I
- 30S ribosomal protein S18
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