IL_4WZO_041

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGU*AUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_041 not in the Motif Atlas

Geometric match to IL_4TS2_003

Geometric discrepancy: 0.2217

The information below is about IL_4TS2_003

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

4WZO|1|13|G|941
4WZO|1|13|G|942
4WZO|1|13|U|943
*
4WZO|1|13|A|1340
4WZO|1|13|U|1341
4WZO|1|13|C|1342

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 2K

Transfer RNA; tRNA

Chain 3K

Transfer RNA; tRNA

Chain 6E

30S ribosomal protein S7

Chain 8E

30S ribosomal protein S9