IL_4WZO_301

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUAAGUG*CUUAAG

Length

13 nucleotides

Bulged bases

4WZO|1|1H|U|1142, 4WZO|1|1H|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_301 not in the Motif Atlas

Geometric match to IL_4WF9_039

Geometric discrepancy: 0.1067

The information below is about IL_4WF9_039

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.5

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

4WZO|1|1H|C|1018
4WZO|1|1H|U|1019
4WZO|1|1H|A|1020
4WZO|1|1H|A|1021
4WZO|1|1H|G|1022
4WZO|1|1H|U|1023
4WZO|1|1H|G|1024
*
4WZO|1|1H|C|1140
4WZO|1|1H|U|1141
4WZO|1|1H|U|1142
4WZO|1|1H|A|1142|||A
4WZO|1|1H|A|1143
4WZO|1|1H|G|1144

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 51

50S ribosomal protein L6

Chain 58

50S ribosomal protein L13