IL_4WZO_308

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

4WZO|1|1H|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_308 not in the Motif Atlas

Geometric match to IL_5B2P_002

Geometric discrepancy: 0.2526

The information below is about IL_5B2P_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

4WZO|1|1H|G|1087
4WZO|1|1H|A|1088
4WZO|1|1H|G|1089
4WZO|1|1H|U|1090
4WZO|1|1H|G|1091
*
4WZO|1|1H|C|1100
4WZO|1|1H|U|1101
4WZO|1|1H|C|1102

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains