IL_4WZO_352

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

4WZO|1|1H|C|2111, 4WZO|1|1H|G|2112, 4WZO|1|1H|U|2113

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_352 not in the Motif Atlas

Geometric match to IL_1KXK_003

Geometric discrepancy: 0.1757

The information below is about IL_1KXK_003

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

4WZO|1|1H|G|2110
4WZO|1|1H|C|2111
4WZO|1|1H|G|2112
4WZO|1|1H|U|2113
4WZO|1|1H|A|2114
4WZO|1|1H|G|2115
4WZO|1|1H|G|2116
4WZO|1|1H|A|2117
4WZO|1|1H|U|2118
4WZO|1|1H|A|2119
4WZO|1|1H|G|2120
*
4WZO|1|1H|C|2178
4WZO|1|1H|C|2179

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 3K

Transfer RNA; tRNA

Chain 71

50S ribosomal protein L1