3D structure

PDB id
4WZO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complex of 70S ribosome with tRNA-fMet and mRNA
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
CUGUGAAC*GGGAG
Length
13 nucleotides
Bulged bases
4WZO|1|1H|U|2132
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4WZO_355 not in the Motif Atlas
Homologous match to IL_5J7L_330
Geometric discrepancy: 0.4783
The information below is about IL_5J7L_330
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_70923.9
Basepair signature
cWW-tSS-tSH-L-tHS-tHS-cWW
Number of instances in this motif group
27

Unit IDs

4WZO|1|1H|C|2129
4WZO|1|1H|U|2130
4WZO|1|1H|G|2131
4WZO|1|1H|U|2132
4WZO|1|1H|G|2133
4WZO|1|1H|A|2134
4WZO|1|1H|A|2135
4WZO|1|1H|C|2136
*
4WZO|1|1H|G|2155
4WZO|1|1H|G|2156
4WZO|1|1H|G|2157
4WZO|1|1H|A|2158
4WZO|1|1H|G|2159

Current chains

Chain 1H
23S ribosomal RNA

Nearby chains

Chain 71
50S ribosomal protein L1

Coloring options:


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