IL_4WZO_389

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGG*CCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CGG,CCG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_389 not in the Motif Atlas

Homologous match to IL_4V9K_064

Geometric discrepancy: 0.3479

The information below is about IL_4V9K_064

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4WZO|1|1K|C|52
4WZO|1|1K|G|53
4WZO|1|1K|G|54
*
4WZO|1|1K|C|62
4WZO|1|1K|C|63
4WZO|1|1K|G|64

Current chains

Chain 1K

tRNA-fMet

Nearby chains

Chain 1H

Large subunit ribosomal RNA; LSU rRNA

Chain 88

50S ribosomal protein L16