IL_4WZO_395

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GAAACCCC*GGGACUGAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_395 not in the Motif Atlas

Homologous match to IL_6CZR_360

Geometric discrepancy: 0.1862

The information below is about IL_6CZR_360

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WZO|1|13|G|450
4WZO|1|13|A|451
4WZO|1|13|A|452
4WZO|1|13|A|453
4WZO|1|13|C|454
4WZO|1|13|C|455
4WZO|1|13|C|456
4WZO|1|13|C|457
*
4WZO|1|13|G|475
4WZO|1|13|G|476
4WZO|1|13|G|477
4WZO|1|13|A|478
4WZO|1|13|C|479
4WZO|1|13|U|480
4WZO|1|13|G|481
4WZO|1|13|A|482
4WZO|1|13|C|483

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 7I

30S ribosomal protein S16