IL_4WZO_403

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCCCCAAGUC*GCG

Length

13 nucleotides

Bulged bases

4WZO|1|14|U|1012

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_403 not in the Motif Atlas

Geometric match to IL_8C3A_029

Geometric discrepancy: 0.1865

The information below is about IL_8C3A_029

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

4WZO|1|14|C|1004
4WZO|1|14|C|1005
4WZO|1|14|C|1006
4WZO|1|14|C|1007
4WZO|1|14|C|1008
4WZO|1|14|A|1009
4WZO|1|14|A|1010
4WZO|1|14|G|1011
4WZO|1|14|U|1012
4WZO|1|14|C|1013
*
4WZO|1|14|G|1149
4WZO|1|14|C|1150
4WZO|1|14|G|1151

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 15

50S ribosomal protein L13

Chain 85

50S ribosomal protein L20