IL_4WZO_436

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCUAG*CAAAC

Length

10 nucleotides

Bulged bases

4WZO|1|14|U|877

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_436 not in the Motif Atlas

Homologous match to IL_5J7L_274

Geometric discrepancy: 0.3493

The information below is about IL_5J7L_274

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

4WZO|1|14|G|875
4WZO|1|14|C|876
4WZO|1|14|U|877
4WZO|1|14|A|878
4WZO|1|14|G|879
*
4WZO|1|14|C|898
4WZO|1|14|A|899
4WZO|1|14|A|900
4WZO|1|14|A|901
4WZO|1|14|C|902

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 45

50S ribosomal protein L16

Chain D5

50S ribosomal protein L25