IL_4WZO_441

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGAAGAAG*UGUAAAC

Length

15 nucleotides

Bulged bases

4WZO|1|1G|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_441 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.2233

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

4WZO|1|1G|G|409
4WZO|1|1G|G|410
4WZO|1|1G|A|411
4WZO|1|1G|A|412
4WZO|1|1G|G|413
4WZO|1|1G|A|414
4WZO|1|1G|A|415
4WZO|1|1G|G|416
*
4WZO|1|1G|U|427
4WZO|1|1G|G|428
4WZO|1|1G|U|429
4WZO|1|1G|A|430
4WZO|1|1G|A|431
4WZO|1|1G|A|432
4WZO|1|1G|C|433

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 32

30S ribosomal protein S4