IL_4X62_073

3D structure

PDB id

4X62 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

GUUGCCAGC*GGGCACUC

Length

17 nucleotides

Bulged bases

4X62|1|A|U|1125, 4X62|1|A|C|1129

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4X62|1|A|G|1124
4X62|1|A|U|1125
4X62|1|A|U|1126
4X62|1|A|G|1127
4X62|1|A|C|1128
4X62|1|A|C|1129
4X62|1|A|A|1130
4X62|1|A|G|1131
4X62|1|A|C|1132
*
4X62|1|A|G|1142
4X62|1|A|G|1143
4X62|1|A|G|1144
4X62|1|A|C|1145
4X62|1|A|A|1146
4X62|1|A|C|1147
4X62|1|A|U|1148
4X62|1|A|C|1149

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10