IL_4X65_055
3D structure
- PDB id
- 4X65 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.35 Å
Loop
- Sequence
- GU(5MC)AC*GAAGUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4X65_055 not in the Motif Atlas
- Homologous match to IL_4LFB_058
- Geometric discrepancy: 0.1594
- The information below is about IL_4LFB_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4X65|1|A|G|1405
4X65|1|A|U|1406
4X65|1|A|5MC|1407
4X65|1|A|A|1408
4X65|1|A|C|1409
*
4X65|1|A|G|1491
4X65|1|A|A|1492
4X65|1|A|A|1493
4X65|1|A|G|1494
4X65|1|A|U|1495
4X65|1|A|C|1496
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain a
- RNA (5'-D(*AP*(MA6)P*AP*UP*UP*U)-3')
- Chain b
- RNA (5'-D(P*GP*AP*CP*UP*(70U)P*UP*UP*(12A)P*AP*(PSU)P*C)-3')
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