IL_4XCO_001

3D structure

PDB id

4XCO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Signal-sequence induced conformational changes in the signal recognition particle

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAG*UAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4XCO_001 not in the Motif Atlas

Geometric match to IL_4XCO_004

Geometric discrepancy: 0.1845

The information below is about IL_4XCO_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05502.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

4XCO|1|E|G|152
4XCO|1|E|A|153
4XCO|1|E|G|154
*
4XCO|1|E|U|175
4XCO|1|E|A|176
4XCO|1|E|A|177
4XCO|1|E|C|178

Current chains

Chain E

RNA

Nearby chains