IL_4XLR_004
3D structure
- PDB id
- 4XLR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of T.aquaticus transcription initiation complex with CarD containing bubble promoter and RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.3 Å
Loop
- Sequence
- GACAAAAGTG*CACTTTTGTC
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4XLR|1|R|DG|4
4XLR|1|R|DA|5
4XLR|1|R|DC|6
4XLR|1|R|DA|7
4XLR|1|R|DA|8
4XLR|1|R|DA|9
4XLR|1|R|DA|10
4XLR|1|R|DG|11
4XLR|1|R|DT|12
4XLR|1|R|DG|13
*
4XLR|1|S|DC|36
4XLR|1|S|DA|37
4XLR|1|S|DC|38
4XLR|1|S|DT|39
4XLR|1|S|DT|40
4XLR|1|S|DT|41
4XLR|1|S|DT|42
4XLR|1|S|DG|43
4XLR|1|S|DT|44
4XLR|1|S|DC|45
Current chains
- Chain R
- DNA (48-MER)
- Chain S
- DNA (48-MER)
Nearby chains
- Chain J
- DNA-directed RNA polymerase subunit beta'
- Chain L
- RNA polymerase sigma factor SigA
Coloring options: