IL_4Y1N_003
3D structure
- PDB id
- 4Y1N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Oceanobacillus iheyensis group II intron domain 1 with iridium hexamine
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAAGGGUGU*AAUCUGAAG
- Length
- 18 nucleotides
- Bulged bases
- 4Y1N|1|A|G|83
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4Y1N|1|A|C|76
4Y1N|1|A|A|77
4Y1N|1|A|A|78
4Y1N|1|A|G|79
4Y1N|1|A|G|80
4Y1N|1|A|G|81
4Y1N|1|A|U|82
4Y1N|1|A|G|83
4Y1N|1|A|U|84
*
4Y1N|1|A|A|99
4Y1N|1|A|A|100
4Y1N|1|A|U|101
4Y1N|1|A|C|102
4Y1N|1|A|U|103
4Y1N|1|A|G|108
4Y1N|1|A|A|109
4Y1N|1|A|A|110
4Y1N|1|A|G|111
Current chains
- Chain A
- group II intron, domain 1
Nearby chains
- Chain B
- Group II catalytic intron D1-D4-3
Coloring options: